EXPIRED
MOLECULAR EPIDEMIOLOGY OF CANCERS ASSOCIATED WITH ACQUIRED IMMUNODEFICIENCY RELEASE DATE: November 7, 2002 PA NUMBER: PA-03-024 (see replacement PA-04-157) Expiration Date: This PA will expire on September 16, 2004 (per replacement PA-04-157). National Cancer Institute (NCI) (http://www.nci.nih.gov/) National Institute of Alcohol Abuse and Alcoholism (NIAAA) (http://www.niaaa.nih.gov/) National Institute on Drug Abuse (NIDA) (http://www.nida.nih.gov/) National Institute of Child Health and Human Development (NICHD) (http://www.nichd.nih.gov/) This Program Announcement (PA) replaces PA-00-086, which was published in the NIH Guide on April 6, 2000. THIS PA CONTAINS THE FOLLOWING INFORMATION o Purpose of the PA o Research Objectives o Mechanism of Support o Eligible Institutions o Individuals Eligible to Become Principal Investigators o Where to Send Inquiries o Submitting an Application o Peer Review Process o Review Criteria o Award Criteria o Required Federal Citations PURPOSE OF THIS PA The Division of Cancer Control and Population Sciences of the National Cancer Institute (NCI), the National Institute of Alcohol Abuse and Alcoholism (NIAAA), the National Institute on Drug Abuse (NIDA), and the National Institute of Child Health and Human Development (NICHD) invite grant applications for interdisciplinary studies to better understand the molecular epidemiology and role of cofactors in the etiology and pathogenesis of pre-neoplastic conditions and cancers occurring among persons infected with the human immunodeficiency virus (HIV), specifically those cancers associated with viruses such as human papillomavirus(HPV), Epstein Barr virus (EBV), human herpesvirus 8/Kaposi sarcoma associated herpesvirus (HHV8/KSHV), and hepatitis viruses B and C. The initiative will also include malignancies arising within the context of acquired immunosuppression from non-HIV sources, such as organ transplants, and include the oncogenic virus, HTLV. While the primary emphasis is on malignant outcomes, cofactors of interest include host genetic susceptibility and phenotype; gender differences; and the role of endogenous and exogenous hormones; temporal association of acquisition of the oncogenic virus relative to time of HIV acquisition; effect of circulating viral load on the oncogenic virus; and role of behavioral factors such as tobacco use, diet, illegal drug and medication use; and alcohol abuse. It is expected that enhanced understanding of the molecular epidemiology of these tumors within the context of host immunodeficiency will yield information important to cancer control and prevention, including development of prophylactic vaccines, chemotherapeutic treatment modalities, and other biomedical and behavioral preventive interventions. The NIAAA is interested in alcohol intake as an agent provocateur in the development of cancers associated with HIV. Alcohol is associated with immunosuppression and it is thought that alcohol ingestion may predispose the individual to a more profound or accelerated course to malignancy. The NIDA is interested primarily in epidemiological studies pertaining to use of illegal drugs and medications on the immune system, hepatitis viruses, HIV progression and oncogenesis. The NICHD is interested in gender differences and the role of exogenous hormones as they apply to the immune system and modulation of oncogenic viruses. RESEARCH OBJECTIVES Infection by the human retrovirus, HIV, is a major public health problem throughout the world, particularly in the developing world. Retroviruses may be directly oncogenic, or may foster the development of human cancers indirectly through immune suppression and subsequent reactivation of previously latent human oncogenic viruses. In addition, alcohol and illegal drug use may affect or accelerate these processes. The young age at which most people in the world become infected with HIV coupled with time spent living in an immunodeficient state portends that malignancies will have a significant impact on years of potential life lost and quality of life. The NCI, NIAAA, NIDA and NICHD have had a continuing interest in the study of the molecular epidemiology of pre-neoplastic conditions and cancers occurring among immunodeficient persons who may also be using illegal drugs or alcohol, and exogenous hormones. Studies have revealed that prognosis for some AIDS-related malignancies have improved in the era of highly-active antiretroviral therapy (HAART). One of the most remarkable outcomes is the decline in Kaposi sarcoma. Systemic non-Hodgkin lymphoma appears to be declining as well but to a lesser degree. However other cancers, notably those associated with epithelial tissues (anogenital dysplasias and invasive cervical cancers) have not declined to a significant degree during the HAART era. These cancers appear to persist and progress in HIV-infected individuals on HAART therapy, and/may be refractory to standard therapies. Overall, the long-term efficacy of antiretroviral therapy on HIV progression and HIV/AIDS-associated malignancies is still being debated. The cancers of interest in this PA are ones associated with concomitant infection with viruses that frequently confer latency, such as Epstein Barr virus (EBV), human herpesvirus 8/Kaposi sarcoma associated herpes virus (HHV8/KSHV), human papillomavirus (HPV), hepatitis B and C, and HTLV. In each case, infection by the concomitant virus appears to be necessary, but not sufficient, for subsequent tumor development. The proposed scope of the PA also includes host immune suppression from other conditions such as organ transplantation. This PA seeks to encourage research on the molecular epidemiology of preneoplastic conditions among persons with acquired immunodeficiency throughout the world and comparative epidemiologic studies based in several geographic areas. An interdisciplinary approach that links the expertise of basic scientists with that of epidemiologists, clinicians, and behavioral scientists in an etiologic study is strongly encouraged. Investigations may be conducted in adults or children. The areas of research listed below are not intended to be all-inclusive, but rather are designed to give the applicant some direction as to the types of research that the NIH is interested in stimulating. The NCI is interested primarily in issues related to oncogenesis and cancer; the NIAAA is interested in the areas of research with a special emphasis on the impact of ethanol ingestion on oncogenesis and progression to AIDS; the NIDA is interested in the use of illegal drugs and medications on the immune system and oncogenesis; and the NICHD is interested in the role of endogenous hormones (as manifested by gender differences)in oncogenesis, the interaction of the viruses and the immune system, disease progression and the effect of exogenous hormones on the above. o The evaluation of HIV-associated malignancies in international settings of high HIV incidence and prevalence, including India, South East Asia, Eastern Europe, Central/South America, and Africa, that offer unique research opportunities o The role of lifestyle factors such as alcohol, injectable drugs, tobacco, and nutrition in the pathogenesis of HIV/AIDS-associated pre- neoplastic changes and malignancies o The incorporation of studies conducted through specimen bank programs for correlative research on HIV/AIDS associated malignancies o The incidence and trends of cancers associated with long-term immune suppression in the era of HAART and HIV disease, and organ transplantation o The (treated) natural history of cancers and pre-neoplastic changes in situations where the temporality of observed events, including timing of first infection or reactivation of existing infection, may be addressed o The interplay of routes of acquisition, especially the oral route, of the oncogenic virus and other cofactors on the molecular epidemiology and natural history of immunodeficiency associated pre-neoplastic and malignant processes o The effect of endogenous hormones (gender differences) and exogenous hormones on the up or down regulation of HIV and oncogenic viruses, and what impact that may have of disease progression MECHANISM OF SUPPORT This PA will use the National Institutes of Health (NIH) research project grant (R01) and competing supplements to existing NCI, NICHD, NIAAA and NIDA funded (R01) grants, as the award mechanism. Responsibility for the planning, direction, and execution of the proposed project will be solely that of the applicant. The supplement must have the same Principal Investigator as the parent grant. The total requested project period for an application submitted in response to the PA may not exceed five years. Competing supplements must not extend beyond the funding period of the parent grant; the parent grant must have at least one year remaining in its project period after award of the supplement. This PA uses just-in-time concepts. It also uses the modular as well as the non-modular budgeting formats (see http://grants.nih.gov/grants/funding/modular/modular.htm). Specifically, if you are submitting an application with direct costs in each year of $250,000 or less, use the modular format. Otherwise follow the instructions for non-modular research grant applications. ELIGIBLE INSTITUTIONS You may submit (an) application(s) if your institution has any of the following characteristics: o For-profit or non-profit organizations o Public or private institutions, such as universities, colleges, hospitals, and laboratories o Units of State and local governments o Eligible agencies of the Federal government o Domestic or foreign o Faith-based or community-based organizations INDIVIDUALS ELIGIBLE TO BECOME PRINCIPAL INVESTIGATORS Any individual with the skills, knowledge, and resources necessary to carry out the proposed research is invited to work with their institution to develop an application for support. Individuals from underrepresented racial and ethnic groups as well as individuals with disabilities are always encouraged to apply for NIH programs. WHERE TO SEND INQUIRIES We encourage your inquiries concerning this PA and welcome the opportunity to answer questions from potential applicants, particularly during the planning phase of the grant applications. Inquiries may fall into two areas: scientific/research and financial or grants management issues: Direct both overall programmatic issues and inquiries with a primary scientific research focus on cancer to: Vaurice Starks, B.S. Division of Cancer Control and Population Sciences National Cancer Institute Executive Plaza North, Room 5103, MSC 7395 Bethesda, MD 20892-7395 Telephone: (301) 402-9375 Fax: (301) 402-4279 Email: vs38j@nih.gov Sandra L. Melnick, Dr.P.H. Division of Cancer Control and Population Sciences National Cancer Institute Executive Plaza North, Room 5103, MSC 7395 Bethesda, MD 20892-7395 Fax: (301) 402-4279 Direct inquiries regarding the AIDS & Cancer Specimen Bank collaborations to: Jodi Black, Ph.D. AIDS Malignancy Program National Cancer Institute Division of Cancer Treatment and Diagnosis 31 Center Drive Room 3A44 Bethesda, MD 20892-2440 Telephone: (301) 402-6293 Fax: (301) 496-0826 Email: jb377x@nih.gov Link to the specimen bank: http://acsb.ucsf.edu/ Direct inquiries regarding applications with a primary focus on alcohol abuse and alcoholism to: Denise Anne Russo, Ph.D. Biomedical Research Branch Division of Basic Research, National Institute on Alcohol Abuse and Alcoholism Willco Building, Room 402 Bethesda, MD 20892-6402 Telephone: (301)402-9403 Fax: (301) 594-0673 Email: DRusso@mail.nih.gov Direct inquiries regarding use of illegal drugs and medications to: Thomas F. Kresina, Ph.D. Center on AIDS & Other Medical Consequences of Drug Abuse (CAMCODA) National Institute on Drug Abuse, NIH 6001 Executive Blvd., Room 5098, MSC 9593 Bethesda, MD 20892-5953 Telephone: (301) 402-1913 Fax: (301) 594-6566 Email: tk13v@nih.gov Direct inquires regarding gender differences and exogenous hormones to: Patricia Reichelderfer, Ph.D. Contraception and Reproductive health branch Center for Population Research National Institute for Child health and Human Development 6100 Executive Blvd., Room 8B13D Rockville, MD 20892 Telephone: (301) 435-6991 Fax: (301) 480-1972 Email: pr20f@nih.gov Direct inquiries regarding fiscal matters to: Ms. Crystal Wolfrey Team Leader, DCCPS Team Grants Administration Branch National Cancer Institute National Institutes of Health 6120 Executive Blvd., Suite 243 Bethesda, MD 20892 Phone:(301) 496-8634 Fax: (301) 496-8601 Email: cw104j@nih.gov Ms. Judy Simons Chief, Grants Management Office Office of Planning and Resource Management National Institute on Alcohol Abuse and Alcoholism 6000 Executive Boulevard, Suite 504, MSC 7003 Bethesda, MD 20892-7003 Telephone: (301) 443-0915 Fax: (301) 443-3891 Email: jsimons@willco.niaaa.nih.gov Gary Flemming, J.D., M.A. Grants Management Branch National Institute on Drug Abuse 6001 Executive Blvd., Room 3131, MSC 9541 Bethesda, MD 20892-9541 Telephone: (301) 443-6710 FAX: (301) 594-6847 Email: gf6s@nih.gov Ms. Kathy Hancock Lead Grants Management Specialist National Institute of Child Health and Human Development 6100 Executive Blvd. Room 8A17M Telephone: (301) 496-5482 Fax: (301) 402-0915 Email: kh246t@nih.gov SUBMITTING AN APPLICATION Applications must be prepared using the PHS 398 research grant application instructions and forms (rev. 5/2001). The PHS 398 is available at http://grants.nih.gov/grants/funding/phs398/phs398.html in an interactive format. For further assistance contact GrantsInfo, Telephone (301) 710-0267, Email: GrantsInfo@nih.gov. APPLICATION RECEIPT DATES: Applications submitted in response to this program announcement will be accepted at the standard AIDS-related and non-AIDS application deadlines, which are available at http://grants.nih.gov/grants/dates.htm. Application deadlines are also indicated in the PHS 398 application kit. SPECIFIC INSTRUCTIONS FOR MODULAR GRANT APPLICATIONS: Applications requesting up to $250,000 per year in direct costs must be submitted in a modular grant format. The modular grant format simplifies the preparation of the budget in these applications by limiting the level of budgetary detail. Applicants request direct costs in $25,000 modules. Section C of the research grant application instructions for the PHS 398 (rev. 5/2001) at http://grants.nih.gov/grants/funding/phs398/phs398.html includes step- by-step guidance for preparing modular grants. Additional information on modular grants is available at http://grants.nih.gov/grants/funding/modular/modular.htm. SPECIFIC INSTRUCTIONS FOR APPLICATIONS REQUESTING $500,000 OR MORE PER YEAR: Applications requesting $500,000 or more in direct costs for any year must include a cover letter identifying the NIH staff member within one of NIH institutes or centers who has agreed to accept assignment of the application. Applicants requesting more than $500,000 must carry out the following steps: 1) Contact the NCI program staff at least 6 weeks before submitting the application, i.e., as you are developing plans for the study; 2) Obtain agreement from the NCI staff that the NCI will accept your application for consideration for award; and, 3) Identify, in a cover letter sent with the application, the staff member from NCI who agreed to accept assignment of the application. This policy applies to all investigator-initiated new (type 1), competing continuation (type 2), competing supplement, or any amended or revised version of these grant application types. Additional information on this policy is available in the NIH Guide for Grants and Contracts, October 19, 2001 at http://grants.nih.gov/grants/guide/notice-files/NOT-OD-02-004.html. SENDING AN APPLICATION TO THE NIH: Submit a signed, typewritten original of the application, including the checklist, and five signed photocopies in one package to: Center for Scientific Review National Institutes of Health 6701 Rockledge Drive, Room 1040, MSC 7710 Bethesda, MD 20892-7710 Bethesda, MD 20817 (for express/courier service) APPLICATION PROCESSING: Applications must be received by or mailed on or before the receipt dates described at http://grants.nih.gov/grants/funding/submissionschedule.htm. The CSR will not accept any application in response to this PA that is essentially the same as one currently pending initial review unless the applicant withdraws the pending application. The CSR will not accept any application that is essentially the same as one already reviewed. This does not preclude the submission of a substantial revision of an application already reviewed, but such application must include an Introduction addressing the previous critique. PEER REVIEW PROCESS Applications submitted for this PA will be assigned on the basis of established PHS referral guidelines. An appropriate scientific review group convened in accordance with the standard NIH peer review procedures (http://www.csr.nih.gov/refrev.htm) will evaluate applications for scientific and technical merit. As part of the initial merit review, all applications will: o Receive a written critique o Undergo a process in which only those applications deemed to have the highest scientific merit, generally the top half of the applications under review, will be discussed and assigned a priority score o Those that receive a priority score will undergo a second level review by the appropriate national advisory council or board. REVIEW CRITERIA The goals of NIH-supported research are to advance our understanding of biological systems, improve the control of disease, and enhance health. In the written comments, reviewers will be asked to discuss the following aspects of your application in order to judge the likelihood that the proposed research will have a substantial impact on the pursuit of these goals: o Significance o Approach o Innovation o Investigator o Environment The scientific review group will address and consider each of these criteria in assigning your application's overall score, weighting them as appropriate for each application. Your application does not need to be strong in all categories to be judged likely to have major scientific impact and thus deserve a high priority score. For example, you may propose to carry out important work that by its nature is not innovative but is essential to move a field forward. (1) SIGNIFICANCE: Does your study address an important problem? If the aims of your application are achieved, how do they advance scientific knowledge? What will be the effect of these studies on the concepts or methods that drive this field? (2) APPROACH: Are the conceptual framework, design, methods, and analyses adequately developed, well integrated, and appropriate to the aims of the project? Do you acknowledge potential problem areas and consider alternative tactics? (3) INNOVATION: Does your project employ novel concepts, approaches or methods? Are the aims original and innovative? Does your project challenge existing paradigms or develop new methodologies or technologies? (4) INVESTIGATOR: Are you appropriately trained and well suited to carry out this work? Is the work proposed appropriate to your experience level as the principal investigator and to that of other researchers (if any)? (5) ENVIRONMENT: Does the scientific environment in which your work will be done contribute to the probability of success? Do the proposed experiments take advantage of unique features of the scientific environment or employ useful collaborative arrangements? Is there evidence of institutional support? ADDITIONAL REVIEW CRITERIA: In addition to the above criteria, your application will also be reviewed with respect to the following: PROTECTIONS: The adequacy of the proposed protection for humans, animals, or the environment, to the extent they may be adversely affected by the project proposed in the application. INCLUSION: The adequacy of plans to include subjects from both genders, all racial and ethnic groups (and subgroups), and children as appropriate for the scientific goals of the research. Plans for the recruitment and retention of subjects will also be evaluated. (See Inclusion Criteria included in the section on Federal Citations, below) DATA SHARING: The adequacy of the proposed plan to share data. BUDGET: The reasonableness of the proposed budget and the requested period of support in relation to the proposed research. Foreign applications and domestic applications with international components may receive a flat rate of 8 per cent indirect costs. OTHER REVIEW CRITERIA: Applications from foreign institutions will be evaluated and scored during the initial review process using the standard review criteria. In addition, the following will be assessed as part of the subsequent review procedures and award decision: o Whether the project presents special opportunities for furthering research programs through the use of unusual talent, resources, populations, or environmental conditions in other countries that are not readily available in the U.S. or that augment existing U.S. resources o Whether the proposed project has specific relevance to the mission and objectives of the National Institutes of Health and has the potential for significantly advancing the health sciences of the U.S. Research grant applications from foreign or international organizations may not be funded unless approved by the IC Advisory Council/Board. AWARD CRITERIA Applications submitted in response to a PA will compete for available funds with all other recommended applications. The following will be considered in making funding decisions: o Scientific merit of the proposed project as determined by peer review o Availability of funds o Relevance to program priorities REQUIRED FEDERAL CITATIONS INCLUSION OF WOMEN AND MINORITIES IN CLINICAL RESEARCH: It is the policy of the NIH that women and members of minority groups and their sub-populations must be included in all NIH-supported clinical research projects unless a clear and compelling justification is provided indicating that inclusion is inappropriate with respect to the health of the subjects or the purpose of the research. This policy results from the NIH Revitalization Act of 1993 (Section 492B of Public Law 103-43). All investigators proposing clinical research should read the AMENDMENT "NIH Guidelines for Inclusion of Women and Minorities as Subjects in Clinical Research - Amended, October, 2001," published in the NIH Guide for Grants and Contracts on October 9, 2001 (http://grants.nih.gov/grants/guide/notice-files/NOT-OD-02-001.html); a complete copy of the updated Guidelines are available at http://grants.nih.gov/grants/funding/women_min/guidelines_amended_ 10_2001.htm. The amended policy incorporates: the use of an NIH definition of clinical research; updated racial and ethnic categories in compliance with the new OMB standards; clarification of language governing NIH-defined Phase III clinical trials consistent with the new PHS Form 398; and updated roles and responsibilities of NIH staff and the extramural community. The policy continues to require for all NIH- defined Phase III clinical trials that: a) all applications or proposals and/or protocols must provide a description of plans to conduct analyses, as appropriate, to address differences by sex/gender and/or racial/ethnic groups, including subgroups if applicable; and b) investigators must report annual accrual and progress in conducting analyses, as appropriate, by sex/gender and/or racial/ethnic group differences. INCLUSION OF CHILDREN AS PARTICIPANTS IN RESEARCH INVOLVING HUMAN SUBJECTS: The NIH maintains a policy that children (i.e., individuals under the age of 21) must be included in all human subjects research, conducted or supported by the NIH, unless there are scientific and ethical reasons not to include them. This policy applies to all initial (Type 1) applications submitted for receipt dates after October 1, 1998. All investigators proposing research involving human subjects should read the "NIH Policy and Guidelines" on the inclusion of children as participants in research involving human subjects that is available at http://grants.nih.gov/grants/funding/children/children.htm REQUIRED EDUCATION ON THE PROTECTION OF HUMAN SUBJECT PARTICIPANTS: NIH policy requires education on the protection of human subject participants for all investigators submitting NIH proposals for research involving human subjects. You will find this policy announcement in the NIH Guide for Grants and Contracts Announcement, dated June 5, 2000, at http://grants.nih.gov/grants/guide/notice- files/NOT-OD-00-039.html. A continuing education program in the protection of human participants in research in now available online at: http://cme.nci.nih.gov/ PUBLIC ACCESS TO RESEARCH DATA THROUGH THE FREEDOM OF INFORMATION ACT: The Office of Management and Budget (OMB) Circular A-110 has been revised to provide public access to research data through the Freedom of Information Act (FOIA) under some circumstances. Data that are (1) first produced in a project that is supported in whole or in part with Federal funds and (2) cited publicly and officially by a Federal agency in support of an action that has the force and effect of law (i.e., a regulation) may be accessed through FOIA. It is important for applicants to understand the basic scope of this amendment. NIH has provided guidance at http://grants.nih.gov/grants/policy/a110/a110_guidance_dec1999.htm. Applicants may wish to place data collected under this PA in a public archive, which can provide protections for the data and manage the distribution for an indefinite period of time. If so, the application should include a description of the archiving plan in the study design and include information about this in the budget justification section of the application. In addition, applicants should think about how to structure informed consent statements and other human subjects procedures given the potential for wider use of data collected under this award. URLs IN NIH GRANT APPLICATIONS OR APPENDICES: All applications and proposals for NIH funding must be self-contained within specified page limitations. Unless otherwise specified in an NIH solicitation, Internet addresses (URLs) should not be used to provide information necessary to the review because reviewers are under no obligation to view the Internet sites. Furthermore, we caution reviewers that their anonymity may be compromised when they directly access an Internet site. HEALTHY PEOPLE 2010: The Public Health Service (PHS) is committed to achieving the health promotion and disease prevention objectives of "Healthy People 2010," a PHS-led national activity for setting priority areas. This PA is related to the priority areas of cancers associated with acquired immunodeficiency. Potential applicants may obtain a copy of "Healthy People 2010" at http://www.health.gov/healthypeople/. AUTHORITY AND REGULATIONS: This program is described in the Catalog of Federal Domestic Assistance Nos. 93.393, 93.856, and 93.121, and is not subject to the intergovernmental review requirements of Executive Order 12372 or Health Systems Agency review. Awards are made under authorization Sections 301 and 405 of the Public Health Service Act amended (42 USC 241 and 284) and administered under NIH grants policies described at http://grants.nih.gov/grants/policy/policy.htm and under Federal Regulations 42 CFR 52 and 45 CFR Parts 74 and 92. The PHS strongly encourages all grant and contract recipients to provide a smoke-free workplace and promote the non-use of all tobacco products. In addition, Public Law 103-227, the Pro-Children Act of 1994, prohibits smoking in certain facilities (or in some cases, any portion of a facility) in which regular or routine education, library, day care, health care or early childhood development services are provided to children. This is consistent with the PHS mission to protect and advance the physical and mental health of the American people.
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